Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11666904 | chr19:21970949 | C/T | 6.24E-5 | 214 | 11.03 | 17.03 | 14.85 | KM Plot |
| KIRP | rs11676282 | chr2:100935320 | A/G | 0.00067 | 212 | 14.03 | 12.58 | 20.03 | KM Plot |
| KIRP | rs11680660 | chr2:100931738 | G/C | 0.000534 | 210 | 13.85 | 13.03 | 20.53 | KM Plot |
| KIRP | rs116905847 | chr17:80814026 | T/C | 8.36E-5 | 214 | 15.33 | 17.2 | 15.15 | KM Plot |
| KIRP | rs116934567 | chr16:20440516 | G/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs11696351 | chr20:37225941 | G/A | 3.33E-16 | 213 | 6.7 | 24.9 | 16.43 | KM Plot |
| KIRP | rs11696353 | chr20:37225950 | G/A | 3.33E-16 | 213 | 6.7 | 24.9 | 16.43 | KM Plot |
| KIRP | rs11698723 | chr20:37225825 | A/G | 3.33E-16 | 213 | 6.7 | 24.9 | 16.43 | KM Plot |
| KIRP | rs11699146 | chr20:37225749 | T/C | 3.33E-16 | 213 | 6.7 | 24.9 | 16.43 | KM Plot |
| KIRP | rs117004177 | chr15:24508411 | T/C | 6.5E-5 | 209 | 17.02 | 14.8 | 10.23 | KM Plot |
| KIRP | rs11702054 | chr21:30237376 | C/T | 0.000397 | 212 | 17 | 15.07 | 1.03 | KM Plot |
| KIRP | rs117024285 | chr11:34842412 | A/G | 0 | 212 | 15.2 | 16.72 | 3.83 | KM Plot |
| KIRP | rs11709240 | chr3:99996511 | A/G | 2.37E-5 | 213 | 16.45 | 19.3 | 3.85 | KM Plot |
| KIRP | rs11709563 | chr3:99970202 | C/T | 8.89E-6 | 214 | 16.47 | 17.8 | 4.67 | KM Plot |
| KIRP | rs11709598 | chr3:190112266 | A/C | 9.91E-5 | 213 | 13.77 | 19.92 | 12.1 | KM Plot |